YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	glct-2
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLKPYGTL LVYFVFFVMV IVLYNKYSES FSSNRRIIVI TPTYRRITRM PDITRMSNTL  60
   61 KQIKNLHWIV IEDGEELVPA VQNVLERSGL PYTYVTHKTA KGYPAKGWYQ RDMALKMLRT 120
  121 NSSQILGNHK GEAVVYFADD DNSYDLRLFD DFIRNVKKLG VWAVGLVGGT IVEAPKVENK 180
  181 KVTSFNVKWE PSRPFAVDMA GFAINLKYIL RSAAVFGPKC HGSGAPETCL LEKLGFELDD 240
  241 IQPFGYEKEE DKEILVWHTR TSIPKSGISV EDDFGYFVEK STVFGFTENQ KFRSCIFYTD 300
  301 LNVYESHKYH LPRVMKLTDL N

Type	Start	End	Confidence
Cytoplasmic	1	6	0.81
Transmembrane Helix	7	27	0.89
Non-Cytoplasmic	28	321	0.86