YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE42824
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKRTRNTL WLLILISAFA INAEIADDKP PKFQVLRAHA TDVPQLKALR DIHERTQHDL  60
   61 DFWQTPSKVG HRADIMVDED RMEWLDSVLK NSNISYDVII EDVGKLILEK EHGPPRFSNL 120
  121 LFSKRMHNEG GNRARYGFGE YHSYQTICDW MKDIERKYPD KAKVFTMGTT SEGRPIQGIK 180
  181 IGSQVWRNDK RIFWIDGGIH AREWAAVHTA LWFIDRLIAD YNDDSLVRAA VDRLNFYILP 240
  241 VANPDGYEYS RSDVSPMIRL WRKNRAGVVC KKDRWFRDRC CGGVDLNRNY DWHFGETGSS 300
  301 TDKCSEIYQG SSAFSESETR SMRDFLTSSE LNGKIDAFIT LHTYSQMWIH PYSHARKSVP 360
  361 ADVAELQRVG RAAVAALENT YGTKYKFGTG SDILYPSAGG SDDWAKGTLR IKYVYLLELR 420
  421 PGEDVWDGFI LDQHQLIPTA KETWNGIKVV IRAVTEQAGS RSSSPRVLPA FVRRPNGSIV 480
  481 RTNVRRPGSR QFIRRPGSFA QQRSGQFRNR NSHRSQVANV AQRPGPPQQA SRSGTCADRS 540
  541 SWCASWLNAN SRVCQISQIY MRQDCARTCG FCQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle