YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE42054
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHKKICIIGA GAAGLVSAKH AIKQGYQVDI FEQTDQVGGT WVYSEKTGCH SSLYKVMKTN  60
   61 LPKEAMLFQD EPFRDELPSF MSHEHVLEYL NEFSKDFPIQ FSSTVNEVKR ENDLWKVLIE 120
  121 SNSETITRFY DVVFVCNGHF FEPLNPYQNS YFKGKLIHSH DYRRAEHYTG KNVVIVGAGP 180
  181 SGIDITLQIA QTANHVTLIS KKATYPVLPE SVQQMATNVK SVDEHGVVTD EGDHVPADVI 240
  241 IVCTGYVFKF PFLDSSLIQL KYNDRMVSPL YEHLCHVDYP TTLFFIGLPL GTITFPLFEV 300
  301 QVKYALSLIA GKGKLPSDDV EIRNFEDARL QGLLNPASFH VIIEEQWEYM KKLAKMGGFE 360
  361 EWNYMETIKK LYGYIMTERK KNVIGYKMVN FELTTDSSDF KVVDI

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	405	0.99