YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VTI1A_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVFERTEQN FQHVCNSITR RIKQLPNYGG EKKKIAVREV ENDIDEALKF ISEMEKLAQN  60
   61 HPQRIKLQTK TKQYHSDIQK YKREVQLAQL QSSNQTNSNP WSNAPDDYQS QYDNQRQHLL 120
  121 QGSNMLDSTS DRLLRTHQIS AQSEQIGQNI LMDLGKQGEQ IRGMRDKLHE TDDQIKSARK 180
  181 IMTGIARRLA TNKVILSIII LLLMGIIALI ICLKWLR

Type	Start	End	Confidence
Cytoplasmic	1	188	0.83
Transmembrane Helix	189	213	0.86
Non-Cytoplasmic	214	217	0.68