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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60463879
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIILILIIF LFFGNSISKL IPSETDCLYN LIVLSKNANT FKLRNDSNWG YYCEDYPNNF  60
   61 KCSDDKGLLT SLTMNGASVI KIDSNNLNCF QKENLIFNLS LFSLDNNFFF QGNNFKNYSF 120
  121 ELNNCIIQSI SNPIKNIDSL TISTNNLLQI ALNASIPVSS LIELTSFTLL NNLPSGELYY 180
  181 FYTNDLSSTS SKSRIKSIDS VTRNIPSLTY VDSVESVNLY FTSGVKNDLS NLTSYLNVKT 240
  241 LQLNGGSSGL SYTFPSDSIK SLTNLNTLIL NNIQFTKPTD GSIDLSTMTS LKSITIVNPG 300
  301 LFSTDAIKAL PMKSLKSFSI TQCSIKSGYP IPGIFNKANS VIESISITSC GMPDNLDIVL 360
  361 PLPKSLRYLE LTNNPLKGTI SNQFCTLQTL KLPNSILING ILPSCFSCHF KNNVILKSNL 420
  421 NLAIGVINIQ NCTNLIANLK IDSILNRTII YGSDLGFDTS YFTTTPSTND WIVDIPSNQF 480
  481 YRNSVDINTF TFNFIYPSIS MTLSTSGPVV TSVYVSNVGL LTIKGTGFSY SISGTIYTIL 540
  541 NDQYCQIRST TFDTIICQLF AYTNITKTKI DATSVLKITG QPDYIFNVTY LPDFTNYYLT 600
  601 CNQNCTGKGF CDRNSGECIC NCHNKGSCDI RNKVCKCFTF WLGDQCIIPD HYVSSVVASN 660
  661 ILGGNVTLKG WYGDDHVNPS VFIGGLECTP IYEIGYSSIK CLIGPGSGVK SVTVIQNGHS 720
  721 WAGQNIYLYN NTLLNCPNDC TNSTMGICDQ RIGQCNCLKS NFIGPDCSIE VVQQPPKSNT 780
  781 TVDTGTGSTD LNNDKTKYTI KIKKLLELDF NNNPVNTIDL FENNWNFKKI NSTSNNNNNN 840
  841 NNSNNLYIFN KIVPLKCNIT YIIEEVENDK EFTFADITFK VTSGSIKLTV EINNYTYISG 900
  901 LNTLQLQMES SVGLTKNEDG TINGQQCDIA NIENIDTENS ALNYVTITKD GTVLYGRFIN 960
  961 RALSDHRPTF ITSQIVEKNI SSITVGLNLP HCIDCIIDPD FSILVQNKEF KSDCKSGNSD1020
 1021 DNERVWFLPV VIVVPVVSAT IIVILSLVVY TKYRRALRLK LQSLMDPKTI KMNDLN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle