YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG5_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDLFINIAS FTIYGIPVIP LFIIVFVILS YYLLLLHDES PLWLEKENVY IDVKEGEQHQ  60
   61 FPSLVENKNP IDNIYLSVIV PAYNEQIRLP SMLDDAIKFL NEKSKKDLKF SYEIIIIDDG 120
  121 SKDSTAKLVT SYIEKQPSSN IRLLKLKQNR GKGGAVKRGI LCSRGKYCLM VDADGATEFK 180
  181 DFNRVEDIMH KIEKNDLGIV CGSRSHLVDS DLVAKRSFLR NILMYGFHIF VQTLCVKGIK 240
  241 DTQCGFKLFT RETARRIFPT LHIERWAFDV EILYLAQKLN IPIAEVAVNW TEIDGSKLDP 300
  301 FSSSIQMAKD IVRIRFRYLL GIWKIKS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.77
Transmembrane Helix	11	35	0.90
Non-Cytoplasmic	36	327	0.82