YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y6481_DICDI
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKYYQIFFL LYLLCILYVI SCGYINPYSP YSSPCLFAPI IGYLYMGGSL SSNSSNNNNN  60
   61 NNNNNNNNNN NNNNNNNNNN NKDSKLTENC NNNSSNNNSD NKSNIKNKQH HHHSNFRNRR 120
  121 GKSNNKNSSD NDDCTKCNKR HHTQSSSYDT SELHQSVSSG LGGSMGSGSQ ALTDIEKDIN 180
  181 EFMNANPSHS LNKQQIQQQQ QLQQQQQQLL KQQQQQQQQQ QQQQQQQQQQ QLEKQRKEQE 240
  241 ETEKKKQLEL QQQQQLQQQQ QNGNGLIIEE DMMEGRILRN ISKVYRDVNE NQPKSYYDYE 300
  301 GYRINWKNVD RYEVIQKIGR GKYSEVFSGI DIETSDEVVI KVLKPVQKLK IQREIKILES 360
  361 LNGGPNIIPL LDSVKDQSSK VCSLVFPFVN KTDIRELVYT LDDYDIRYYI FELLKAIDYT 420
  421 HSKGIIHRDI KPLNIAIDHS KRKLSLIDWG LAEYYHPGKN YNVRVASRHY KPPELLVNMF 480
  481 DYDYSLDMWS LGCLFAGLIL DRDPFFNGDN NNDQLLKIVK VLGTDDLFNF LDKFGLSLTD 540
  541 EQSSLIKPRQ KSNWERFIPY ENDDIAQPDA IDFLDKLLRY DPTERLTAKE AMKHPYFKDF 600
  601 NQSIL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle