YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60469424
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPPRESTID ICHLGTLFVI DKRRTGRFYH NDILEFARTY ASQALLNGRK DDFQSKFQAY  60
   61 CTLKMWNEIS KDRDEIFVEW FTKLFTENPN YIQKFDQHSE TYLTSDAINK MYQILSIKNY 120
  121 YGGDFRSFLD LMQRSAEEED LMKLDEDELD DVVPAQILKN FSKHFIDGFK KLMVSKLFNF 180
  181 ISVNNLIFFF FFFILFYFIN IILGKKKKKI YLNLYIY

Type	Start	End	Confidence
Non-Cytoplasmic	1	180	0.76
Transmembrane Helix	181	204	0.83
Cytoplasmic	205	217	0.76