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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MAND_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSKFVKII WVFGIWILVF TFLIIYNNYD YKSTFGINKF EKRSLKTINQ INNKENGDDK  60
   61 KLSVFLIPHS HCDGGWLQDY DGYYYNIVQY ILSGVVNELN LDKEKKFNWV EIGFFSRWWN 120
  121 DQNEIQKEIV RNLINNKQLS FISGGWVQND EATATIDDVI TQMTQGHQWL KDTLNYTVEY 180
  181 AWQIDPFGYS SSTPTIFSSM GIKGLVINRV SNDVKSYMKS VKEMEFIWKG SESLGEQSQM 240
  241 LVSTLNIHYD YPKHIDPKKD FSLNDRIKGF TKYLNDLSKT RESNILMIPL GDDFRYSNAK 300
  301 TEFSVSKEWV KALQDNKEYY NIKEIKYATL DEYFIALEDS FLRNNKFGKS RKQNVYTETF 360
  361 SDGDDEVSAL SLYNKDFFPY STGNLEYWTG YYTTRPLLKR LIRESSLLQK SSDILYTLAI 420
  421 GENSNNQIDI NNLQTLSNQL NENRNTIALV QHHDIVTGTS RSFVLNDNFQ RLQKSRISNY 480
  481 NIISNSLEYL LNKSNNKTNN NNNNNNKNNN NNNNNNNNNN NNLKNTNSIS TTGSSSSSGS 540
  541 GSSNNNNNTV NKSEPFNFEN AIDLSNESNN QYSLVFHNTL GWEVNQHVSF RIKVNKNDNQ 600
  601 LLESIQLVEA ISNKTIQIQI IPIQDDSNCQ SIENNYIVFA IINLPPLGLN TYYLSIANSE 660
  661 DSKSNFTYLS KPKLLKKGNE INFNNNRFKV EFESNGLISK ITDKNSNEIK TIEQTFHQYS 720
  721 TKKSGPYIFN VKGGKKHGFL ENPDKFIYHD GPLVSQLTML YGVDDYCNVT SIVVQRIYKN 780
  781 NNEINNSNSK SLITENYIET GYSINGDMNR ETTINYKVKD LENDDIFYTD NGLESRKRIY 840
  841 NHDRSVNQNY YPVLGYIKLK ETSENNNHQY TVYVDRSVGA TSPSDGEMEI MIHRTMDTDD 900
  901 WKGVNWPSKD IGRSDAKLYF NMDLVNNQLQ NEKRISLHIT NQPIMFVKKH NNQTGYLLKY 960
  961 SPLSNQLPSN IHLQSLLTLK NNTVGLRLFN IHEVDSNTQS TTDTDKSTLF NELEISNFIE1020
 1021 TGLSFLKLTK NNLIDKFSTR INKKFPIKCG ESEYSFINEK PSSIIFSNNG TNNIIDGENK1080
 1081 GENNKTIETI QIKPHEIKSF TFNFNFQLDQ IIPNNNNNNN KYAINKELNN EYIEQSIENQ1140
 1141 RYEYDFSFFP IKPTFYDDRG KYNRPNHLAL ILSLSIGIPA GILIIVIALV VTYKKRKNRK1200
 1201 TLTSSNSSSN LIQQEDQTDY SP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle