YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STX8A_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNNNNFNSN FNSNRISSTQ PYLSDDARNA LFEGKDRKWG NNNNNNYDTL SNQDVFEKQK  60
   61 RDMEEQDKML DALSGSISRV KDTAITINKT AQEQTDMLDE LDVHVDSTSA RMRNTTKNLI 120
  121 TLTQQSKTTG YCSAICFLLL VLLVIIILAS VL

Type	Start	End	Confidence
Cytoplasmic	1	128	0.85
Transmembrane Helix	129	150	0.94
Non-Cytoplasmic	151	152	0.71