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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SGMA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIPIILLV LIGLLLASVY SHDILITEKG QKSLDKLDKA AATTLQHGEN IQLSCDVCQI  60
   61 GASLLEDFIK KNASLTEIIK GLSDLCIASK EEQPEVCTGI LNNYVPIIVD VLIQSDFTPS 120
  121 QLCGYFKICS ATGSSESSSI SNSFDNEYRQ ESFNKPTMKV NKKPQYKDLS NQEPLVKKFK 180
  181 GNDSIGYILQ ISDVHFDPDY KVGSNPNCGR PLCCRDGVGS AGPIGHYLCD IPFSTVELIF 240
  241 QHLATLTDQL DFIVWTGDNP PHNVWEQSQA QQELATATLA QVIQKTFPNT PVLPSLGNHE 300
  301 AYPADQYVLP NSQWLLDSIY TYWAPWLDAD ALELVKERGY YTSLIKPGLR VMSLNTLEND 360
  361 MINFYNLLPT YLKGPNNQSD WMINTLEQAQ SNGEKVLIIG HIPCTVKSAS TDGWCAMYEQ 420
  421 VVGQFSDVII GQLYGHTHYD QFSVFSDVAT HTIPTGMNYI VPSLTTYQNH EPGYRIYQFD 480
  481 YSTNQIVNYY QYHANITEAN ETGALNFQLT YSAKELYNMD DLSPTSWTKV ANQMKTNSTM 540
  541 FNSYFENLSS SPIKESCDQA CQTKWICQIF GITSSEFDKC YGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle