YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	VPS55_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHDIKGFSC AFAVGLLFNI LACIVSHSGY PIIVVASYFL APFPNILCRN RDSFSSEKGT  60
   61 FEDIGLFLTG LFITSGFAIP MILAHSDIIS GKALAFSMAG GVTVYATIIT FLWFFNRHND 120
  121 EDNNW

Type	Start	End	Confidence
Cytoplasmic	1	7	0.88
Transmembrane Helix	8	34	0.81
Non-Cytoplasmic	35	63	0.71
Transmembrane Helix	64	84	0.95
Cytoplasmic	85	92	0.64
Transmembrane Helix	93	115	0.93
Non-Cytoplasmic	116	125	0.72