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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TGRC1_DICDI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKIILLIL FLFFISGYSM NPPTPIDAIY DDKSFTLIFN SNLPYSTRLI LYKNEKEPRT  60
   61 EMAPNYFNCS LVDGERHCLF HSDEPFSRLW GSIDSKVCVR DKSNTVEDCT FDASGLVYYP 120
  121 KVYNLKYSKK PKTSGEDIVI TGSYLRLFGG PNFLINSIDV NKPFVVKGNF SDPSFDCNNI 180
  181 TVTFPPGSGK FRLYYDETGD NPVPFSYESP IISSSVSDSS KQIITINGDN FFTDKDLVKV 240
  241 SFDGIDQPNF IISVNHKQIQ VNNYNRVDPG PMSVNITVDE VSIEKNYIHC FPAIITSISS 300
  301 VSNHLDGIVT IKGEKLSSTL NSSLTPSITI GDKVCKFIKS TTTELECKLD ANELGGKNLP 360
  361 VNVNFGGCDS TSPNGVSFTY NIPTLSSGSY SNGIVTLIGT NLGTNNESSI QLYGDGIKNT 420
  421 NISQFNVSSS DEKSVTFELP HLRCRSFNIN FTRSGITAKT LSISASLSVN VINRPTVSNG 480
  481 ILNIEIYYMD CTISSSAPSI TVGDSSSASP CSIPSSNSSY YETTCPTPYG TGINKQFIFK 540
  541 LNSETVSDQF SYAPPEVENR TISDDGTNIE LHGNNFGNST SLIKVYLNGS DISSEIQELE 600
  601 DHQLTIKILD SYENGPINIT VDGNYMDSLF YLTLPPVIYR ITNKDNKTLA CGGLITVSGK 660
  661 NLLTSDKEFK VNVKSNNKNT TVFAQDEKIL IVRDESRESS LFVTTFIGVR SGPSTTLTYI 720
  721 KPMISEIPTI ENKIEKGILA IIRGYSFTDI LNASLTVSSE TVPLSCNLEC SLSPNEILDD 780
  781 SDSSETNITN SNTDCLSCHS GSSVKNTSGV LYLLFNSTSF QYNVTIEEIK LSPSPNVSQR 840
  841 DVETKSSKPS NGLIIGSTIG SVGGALAIGA LAYYFKIPFR VKKFIGKKF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle