YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AQPC_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFLHLFTPY TNADNTKLIL RVNESRLRLF TRQLLAEFFG TLFVVYIVSG STLAANFAVS  60
   61 DPIVRVCLIC LVQGFAFAAI IWSISGISGC QLNPAVTVGC VTTGRMGILN GIAFIIFQCV 120
  121 GALVGAGMMK ASLPTFYERD LSATTLATGV NVARGFFLEM VTTSFLVFVV LGVAVYNEWD 180
  181 PKISRVAPLA IGCAVIAGVG FLNLFTGGSL NPARSFGPAV FSDTWHRHYI YWFGPICGGI 240
  241 IAGLFWRIFL SEKVLLIDRP YTDFHRSTYG TATK

Type	Start	End	Confidence
Cytoplasmic	1	33	0.97
Transmembrane Helix	34	55	0.90
Non-Cytoplasmic	56	62	0.76
Transmembrane Helix	63	86	0.81
Cytoplasmic	87	105	0.77
Transmembrane Helix	106	128	0.88
Non-Cytoplasmic	129	154	0.92
Transmembrane Helix	155	176	0.93
Cytoplasmic	177	185	0.86
Transmembrane Helix	186	207	0.93
Non-Cytoplasmic	208	228	0.91
Transmembrane Helix	229	250	0.95
Cytoplasmic	251	274	0.99