YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60469563
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIFSLVLI VLYTINIVLS SQQTYPCPFY RSLSLTNPPM NGDDIYILQS LLTRTTGLEN  60
   61 LSLTSNFDQD TQMALAKFQS LNNVGTTSGT LDVNTANLIL ELNSEDGYVD NGQIPSGFLY 120
  121 KVHVPVYKNR SIETIATLYD SNLNVLLTFP VRTHGQNDNV TGLAENEFCE DGSTPTGLMT 180
  181 FDLNSPEPDP ISFGPYPINR AVQGITGNAA IVISNIRDGI LMHTGEWPDW TPSQPMPNSH 240
  241 GCVHGHPSDI DQVQTILSTQ LNVAIRQNTY GAMPYTHQPQ GILSIELID

Type	Start	End	Confidence
Signal Peptide	1	20	0.96
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	289	0.99