YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60469642
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILILLFLC ILSLCYASNL DSIKANPTEC EACQIVIGYV ENLVLHSNKT QGEIEKELDK  60
   61 LCNMVSPRYK PTCDSIVSVY TTEIIQLILN KETPDLICKE IKVCTTEWEI NTTKLFSKIT 120
  121 EIAMKEIHSV AQKSKSHQLT QNNLRSTSEC EICQVFVSKL ESYISTNKSQ EEIMEELDNA 180
  181 CDYMKSFEQQ CKQMVQDYVP ELIEIMSTTE DPNKVCSQIS LCPNDLSSKN ESKNQRLLKK 240
  241 NIIN

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	244	0.99