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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCD3_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNNVNNIT ETLNSSSSSS SSSGSSSDEE VKSKLNFNQT DEMLKKIKEN KFDWALFKRF  60
   61 IKIVIILYEK PVIPLLLFLL LFGSGVSQTY ISKFTGILLS NIYGSLTSGD KFLFVSSLIK 120
  121 GCFAIGGSAL FDAIIKFIVS IMAWNWRKTL CLYIQNVYFK KSLFYKILAF DDRIDNPDQR 180
  181 ITSDIDNFTT LLSSIVSQCI TGPMVVVYYT YLCYTTIDWY APLIVYGYFF LGYFINKLVM 240
  241 SPMVSINYLQ DKLEGDFRYL HQRIRNFSES IALYNLSKEK QQKKSTTSVD NLDYYDDDHH 300
  301 YHHHHDDGEE SDEYTDKTKI INRKNKNSKN KRSALLKRSN KNIKNEELLV EEEQAKQQFE 360
  361 ALLKNKKRVI FWQFGLNTTS DMFTFFSPLI NYFIISIPVF FLSSKAALEP AQVTVQSYNC 420
  421 IMLASGFSQY INVSQSISDL SGYISRISTM IEVCKKVMGD TSLDIEITKL NEKDKTKSLP 480
  481 NSLIINNRDT SINTDFRHIS LNEGESITLD DVTYFTPKGT QLYEKISICI KKGNNLLIMG 540
  541 PSGSGKSSLI RIINGLWPFF KGSINRPENE DMFFLPQQPY LIFGTLEEQI LYPFSKKQKR 600
  601 IPKSIMRELF QRFDIDYLLD RERFIKKSAQ VNDLTHNWLN QLSPGEQQLI AIIRLIYHKP 660
  661 KFALMDESTS SIPQSLEERV YSVAKELGIT IISVGHRISL LKYHSTLLRF DKDKNWYLED 720
  721 IINQNNQSNN INTINIDNNT NKIAEDSVFD 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle