YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NDKM_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRFARAFP KILASGASQR TFATVQKAFA NPTSKKLIVG SSLLIGSAFA TTSFVACENK  60
   61 SVPLVGLPGT NQERSFIAIK VSSTQRRLIG EIIARFEKKG FKLVGIKILV PTPEHAAKHY 120
  121 EDLNKKPFFN GLVKFFSSGA VVAMVFEGKD VVRTGRVLIG ATDPSQSAPG TIRFDLCIET 180
  181 GRNIIHGSDS NESAAHEIAL WFKEDEIANW VSTNPVYEKM

Type	Start	End	Confidence
Signal Peptide	1	50	0.93
N-region	1	41
H-region	42	47
C-region	48	50
Cleavage Site	50	51
Non-Cytoplasmic	51	220	0.99