YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SRPRB_DICDI
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDSAILNQL KVVLPPHIME IIYFRYNQID TYLKPYNLPI KTDVLLLALF TLIFIIIISK  60
   61 LFGSSGNKTR SVGGRTSNDK KVKRGVNIAI LGLSNAGKTA LLLNLTNVDK KISTHTSITT 120
  121 NNGVYITENK KKLPIIDVPG NGKAKASLPK ILSNSACIIY VIDGTTFIDN STQEAQYLYD 180
  181 ILTNESVYQK KIPVLVFNNK MDLDSTIDTE QVKNILEREL DDLRRTRGAT PIVLGQEEDK 240
  241 KDIYLGIEGT PFQFDHLPND VQFSNGSASP SNGELKEIDD IKNFIQTTTL

Type	Start	End	Confidence
Cytoplasmic	1	43	0.59
Transmembrane Helix	44	63	0.89
Non-Cytoplasmic	64	290	0.72