YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60470440
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQAPNSSSI RESGIGGGGG GGGGGNDKDE MDGSTAIPME PMTSSSGVSS GGGGKVVSHF  60
   61 LLEEDFDSKK RFTSTHKRIF YILTSLAILV TVVLLIVFLL PRGWEGPKKK TNIIMMIGDG 120
  121 MGPAALTMAR VCFHTKGEST SQAHLHLDPY IVGTVKTYSS NSVVTDSAAA ATAYASGVKT 180
  181 YNNAVGVDAN GKPAGTIIEA AKKLGMKTGL VVTTRISDAT PACYFAHSAT RHDEAFIIDQ 240
  241 LLDKEIDVIL GGGKQFFSNK TLQDAVSSKY NYSYVESKQE MEQVEAGRIL GLFADYNIPW 300
  301 EIDRLRDPTL LSTKPSLQEM TTKALNLISQ NNENGFFLMV EGSKIDVAAH INDAPTQIWE 360
  361 TDAFDQTFNL VREWAEKDGN TIVIVTADHE TGGLTLANQM VIDGNPKYSW SPETLLTVNK 420
  421 SADLMAELIK GGADPTKLIF DNTGYTLTSD DLKEINRTKS AYYLNQVIGR IVSNYADIGF 480
  481 TTGGHTGEDV NLYTFGDTIS EGKFETRLKD HQTEIVDNYI DPILRGNINN IDIASFIIKT 540
  541 LNLDIQSITE SLKDFIPKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle