YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60470330
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKPIICPS LLSSDFAFLA RDSNYMLECG ADWLHIDVMD NHFVPNLTLG APIVKSLRKH  60
   61 TKGYFDCHLM VTNPETMIED FKNAGANSIT FHIEATEPRG ITQKVITQIK EAGMKVALCV 120
  121 KPKTPIEEVF PYVDQLDFVL IMTVEPGFGG QSFMKDMMPK VKTLRSKYPN LNIQVDGGLD 180
  181 PSTIDMAAEA GANVIVAGSA LFKPNQDPKE TIKLFKDSIN KHSSN

Type	Start	End	Confidence
Signal Peptide	1	19	0.77
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	225	0.99