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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANB_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVLILFLF VLLLITFINC TNNKILNNEN SSNEDNVINV FLIPHSHCDL GWVQTLEEYY  60
   61 SENVTVILDN VINTLIKDSS KKFNWAEIYY FETWWNEQSS FLQAQVRNLV NNGQLYFVGG 120
  121 GWAQNDEGAT HYQAVINQMT LGHQFLLSEF GVVPEIGWQI DPFGPSTLTA TLFSLMGFKY 180
  181 HVINRIDERI KYIYNDTPDI VGSGWMTTDR SFEFQWYPSH NDQELSIFTH VLDHHYNSPY 240
  241 LIYPNASNPN QSLTTGFDFE SDPTQNPPIN QSNIYERAAV FVEIMQQRSQ LYRHNNLLIP 300
  301 FGNDFRFQNA SLEFDNMDKL ITYINSNSSW GVTIQYATLN EYFEKVESIE PPVEYADIVG 360
  361 QDLFVYTMCL ASDYQAFNTC ANWWSGYYTS YPLLKQTARD SDSLLRVGEM LYSLSCFYSN 420
  421 GFDFDFNIGF YALSMHRNVS GILTHHDAIT GTAKEYVRVN YFQMLNEAQS LTLDYNIPDF 480
  481 VGFLLSNKSL NIDYQSNGSS ILNSTNPGDI IAISFTNSIA WDRIETVSIE IPFVNMAVYD 540
  541 YQLNPIQSQI VQRFDKSNNW YLYFQVATPA LGISTYFIVI LSTDGEILND NSKNLPTPIQ 600
  601 SILSISNELL FNDNDDETTT TTIGNSNFNL NFKFDRDNNN LLTLNSYDDL FNNKIGIPIS 660
  661 QHLIEYTSLS DDAYKFRVQG LPIPLTPINP QFYLTIGPVV QIVTIIYNNN CSQSYLIYND 720
  721 TTSFNPFETD NDNNNNSRLI KNDQYFEIDN IVASGWDKEI SMKFTTNINN QNIFYTNNGL 780
  781 EIMKRQWEIH WNDTFIWSEI TSNFYPMINT GYIVDQQVSD YQQQLTILSK QTFGASSQTN 840
  841 GEFEVLLIRR SNYTQWSVHE PMNDTSNPSL RVLCIFGDPN FSNEIRTPHS ILFENPLQPV 900
  901 YSLIPNSIPI EKYIDTYNTL FKPLQTSLPY NLHLLTFTKQ WIDSPSIIMR LINIYEIGQS 960
  961 INFSKSINFN IGSGDNNNNN NNNNNNGFLT HYNISQIIET TLSANSELSN PTNNLVITLE1020
 1021 PLEIKTFLLT LSPKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle