YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60468622
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIIYLFVL MFAVFCINAI TESPLSAQTP SFTPCHSLQS ESASSNGGSN NVGSQTDSRS  60
   61 ISSESQSASG QNTASQSSSQ SASQSASQSA SQSASSGNAA SQSASQSASQ SGSQSGSQSG 120
  121 SQSASSQNAA SQSVASGSQS VASGSQSVAS GSQSVASGSQ SVSCQNSVSH SPSQSASQSD 180
  181 SQISSQGVVS QSATQSASQS SSQGSSQSVN QSASQSANHS ASQSANQSVA SQGSANQSAS 240
  241 QSVSSQSASQ SASQSASQSA SQSV

Type	Start	End	Confidence
Signal Peptide	1	27	0.85
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	264	0.99