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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKB_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.20
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSEQTNSF ESSNNNNNNI DSNINNNLEN NNNKNNNNNN NNNNNNNNNN NNIENSIDKN  60
   61 NKEDNSLVGV NSHRKHRTRL KSKKGNKHET KKEIDYKDLL IKLPHNAVSN FNSLENESSD 120
  121 NLTPPPPINS SPLPLPLSLP LPLSLPLPLP LPLPLPLPLP PNKENIEINM EDIIIPENKI 180
  181 KNKNNNNNID INNNNNNNNE KQTSIIEMED LDKLKQPKIN EGSTGKKGKS HFFSFLQRGD 240
  241 KTNSSILKSS EQPTHKKTKT NINTPPDYPI HYFGHHKRFS SSSDEGSDNS KSQHSSVNTP 300
  301 TLSRHNIDSL PESQQSQKQS QQQSQQPQQQ NKTKQIQQTI LNNNNDNLNE VTPIKKSSLP 360
  361 TLEVSPIQSN IINNQTTEKH NSGGFTALTS ASAMNHQNQR RYREHHQINH QQQQQQHHRH 420
  421 YHHHINSGGS SGSSDKFDYV SATGLSTKNG FNPKSLDVDH FPISDKRNNI NIQAPSTPVQ 480
  481 SRNYPLFTTQ SPKNANSASK SKNKLKNLKR KIASSITGNN PSGISSSAFN HSFSSWNNNN 540
  541 SVYTGGNSGG GSGGGGSGGG GGGGGGGGGI GTPSSFLDDN NNLNNGENFK NSNSYNNNNG 600
  601 SNRSISHDEW LRQFYHKHLE RYEKTKAVDY LIIKPWNFIS WILRPSRIAN YQSKILYRRA 660
  661 YILNFLNLVL FVVYLLSTIL SSNEWFIFAP GILLSVIYFF LGKINNKMYL IAFLTISTAV 720
  721 AINITSIIYD LTHTRPTDKL IFSWDLLVMI MVPLLFPSIV YSIVILISVA VTYIGLGIYV 780
  781 QSSHNFYLLD AYDSFGELLR SIIIVFVILM FYTILSSVDL KEIERKESRI QSLFRISNEA 840
  841 LVVHKDGLIT DANPAFESMF QIKLQDLLYP IQSGIWEFLP ALEGMFEPGA SKLFDNPDMG 900
  901 VIETTGIDSS GRTFQVEVRT NKATYDGEPV DVISIIDITG RKQLMEADYA LRKAEAANEA 960
  961 KVIFLTTVSH ELRTPINGVL ASADILERTT LDSTQKEFLN CIKLSGNYLL DLINDILDYS1020
 1021 KIEAGKMEII KYDFSILKML DNSIRIVSKN IYEKGLDLCI FIDPNVPVIV NGDQRRIKQI1080
 1081 LLNFLSNSIK FTNHGQIIIR VKLESDDSTH SLIKFDVEDS GIGIKTEHLN QLFASFSQID1140
 1141 SGNSRKYQGT GLGLSISKRL CKMMGGDVKV KSEFGVGSTF SFTIPCGIPN TTTRFSLQSL1200
 1201 GSAIYMGEDI QGINKPIGKK KYGASGVVGI VIDSNKYTRK SISQYFAILK ISCVDFENKK1260
 1261 EFENYLSTLA TVDQTTNPQV YLVITSIIDI NQLTTNGLPR DRIYHWILME SPNEERKLPL1320
 1321 EFENRFVKPA QFADIVRCLY KIDSINFFIE QMAGSPYKAS KDLQSGGSSN ESGDGGRSLS1380
 1381 GGGGGVGSNG NGNGGGGLDS NISPSELSSS EHQLISTPLS DVNEFEDINL INQSLSGLGP1440
 1441 SAKVLNSTYF NGLSQSSKIY NNNNRNGVGI GNHHHDHYYQ HRHHHSLPPE EIDYDESPFL1500
 1501 FLNKPIRKVY HSQPSTPVTN GIALMDSSSK SPSIPSSSSA SASALSPNSR HSNELGNGKT1560
 1561 TQSFVFSPTS RKFSLNDSFN PSISTIVLPQ VSYSPSMQGG NFPINMESVY KKIESHNNNF1620
 1621 KRSESKPSTP TFLSNQPSPA TSNSPQLLQS PTTSTTGSIN LSPHRSPNIR LPLEVRSGSL1680
 1681 SSLKPLREDE ELESISDDHT SHLKGSSHSI NQQIPSTIQQ QQQQQQQQQQ QQQQQQQQQQ1740
 1741 QQQQQQQQQQ QQQQQKPQQQ QQKPTTTTTT TSTQLPQNIE KTTTTTTTST TKPTATSSSS1800
 1801 SSSKTTKTQQ QQHHPTTTTT TKSEKIEKTA AATTSEKIEK ILLVEDNFVN VKIFSKLLKD1860
 1861 SGYIFDVAHN GVEAVECVKK GAYDLILMDC QMPEMDGFEA TTAIRELEKS NLIESPPSKK1920
 1921 HSHVVIVALT ANSGYKDKQK CLSVGMNDFL QKPIKTSDIL IQMIKKHLN

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