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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKM_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYLNANST ENNNNNNNNN NNNNNNINNN FNTTDFKIVG NFNTPPIGSN NNNNNNNNSI  60
   61 STQSLQTINE CNSGGEQSPK IKTNNNSYNT PVSSSTSTTG TNTTPMKSTP IHNSLQNIFK 120
  121 NANRSNLNNN NNNNNNNNNN NNNNNNNNNN NNSGCGSGSL NSVNNNNNNN NNNNNNSNNN 180
  181 NSNSNSNSNN NNNSNSNNNN NNSNSNAYPL KYYQHPQQSC SNLDSFENLS PLRQSSTLLN 240
  241 FSSNNNNNNN NNNNNNNNNS NNNSSNNNNK NNSSKNKVGG GNNKNNGGDD SAQFISSDNK 300
  301 YNTVGNETHH HHHHQLHNHR HSNVQGSSSP IKSSPKLISS QSLGNIFSQI SPNIALTTNI 360
  361 SPHGSPFSSS SSSRKSSSSP SFLNQNNQNN PNNQNNQNNS TSPHEKSFLN NSNDSFDYND 420
  421 NSKRLRNRLT RNTGYSSTGS IGNSSSSSFY NNNNENSNIY SKIKHTRSSS GGNKPSPKYF 480
  481 QTSQAIYTPP YPQPYPQPPQ LPPPSSSSSL SKENDNVDNN NTNNNNNNNN NNNNNNNNNN 540
  541 NESFFSSKGT MNLIHISLLS VLAFYIFLMV SKKFLFRVFQ WNNNINSLFI LIFSFHFIFS 600
  601 SILMFLLVVL LKMKKYSHSI SQSARESLRN SRVIPSLLNF FLSDYIFLGL VLSGLVNILQ 660
  661 VNLFFNPKDP LLNLDSISNI STAIEFLVVG IVLNFSHIPK KMYNSRYSEF RVSSSISPYF 720
  721 QDESYNVNNI INNDNKNKIN DKSDNSNSIT NNNNINNNID NNNNSSSNTK INNDLNFDNN 780
  781 IKNNDINNNI TNNNNNNNNN NNNNNNTNNN NNNNNNNSNN NNNNNNNNSN KNNNTNSNNN 840
  841 NNNSSNNNNT NNNKINDNKN NNNNNNNNNN NNNNNNNNNN NEEDDEEEKN DWSYSFQIFF 900
  901 TRIFLCLSIT YTLIVLRLNY DPLNQFLQQS SSFGSGANGN SGGGNVNTII SPVQFQAPLA 960
  961 TLLHFIQLVL LLVNYNRFRT NRFFSLILST IFIEVSSWET FGLNSRLFES YIFEALLIRR1020
 1021 WIRACSVGFP IVGIILDIYS GWMSINQSIK SIDQQNIMIV NRFNYLCSNV KKQEELTQYN1080
 1081 SQFYIESMNQ FKRLVQNTGS IISLIYDTDV QPNQEAYLSK FSSSYEQLSK LTKECLFYSE1140
 1141 IKQLKRNDVE NLSFVVSNLL EDLISTPSIR TQFEEKEIDL FYLIDKDVPL SLVGDSQKIK1200
 1201 QILLKLITNS IKATYEGEVY IRVSLSSNLG VLKQQPIHHH RHHHRHHHHH HHHHHHHIID1260
 1261 DDDYDDDNDD DNNTEDSSSC CNIDELSDKI KDNQDENLEL KKSNNDKIIE NKENQENNNN1320
 1321 NNNNNNNNNN NNNNNNNNSN NNTNININTN NNNDSNNNNC INNDLKNNNN NSNNNVNNNN1380
 1381 NNINDSNNNN NSNNNNINNN INNNINNNNN IKKKKKKNEF TVYFSVIDSG SGIDPYSTNL1440
 1441 LFQPFSLSSY NVNSTNTDGE FGLGLAICKQ LSNLMNGEIK YETEMEKGSV FELQVPMKCD1500
 1501 SISSITSSMN STTNTTNHYP RIMNNQSSKF FANSKWGEGL KILVIDDNPN IGKVIAMHLE1560
 1561 PFGFKVFQRT TFQSAIYFFN ERNGDFNLIL LDPLIPSLVI DEIKQMKQDS SNIIKNPPLV1620
 1621 IMCTAKLRKS LNVDNVHYLY KPIKREQLTV LSQLLPNTST INPIYSNQNL NNSGSSNGGG1680
 1681 GGGGGGGGGG GGGGSGSSNI DFNKTKLGGS NISTGIGNSG LINSNNIPTP VNTPSNIIPN1740
 1741 LLSCQSLLTS LNNANIPQLT NDIGITNNNI NNNSLMFTTP NSTLSNNGIT GLDNNSNNDT1800
 1801 GSIDNNSNIS TNIDNNNDYF IRNNGIPPQN DMNTYNNYVL NHQQGVLPKS LSVPSTPLSY1860
 1861 NMLPTNLNIN AKRSSLQPLN ENSVLPTNLT PPILSASPQS LLPMGNDINS ILPNTQQSQI1920
 1921 DLQSQIELQP LLQSTIIRND RGGDILPDST LEGQITNLSG NNSTISINPP LPETNNNTTT1980
 1981 TTTTTQPKKS PILTSSNGSD KSEGSTGSNR SKSRISFLNS SNSGLLKNNL GEDIYCKGDQ2040
 2041 SEGIPIPKSE RTSDSSSSSS SSDSHGQDDH SYRLEDFSIS SPSSQSPLLD LSGTSGTSGT2100
 2101 TNLANSGINS GSGSGGGDII NQNQLITSNQ LFQQQLQQQQ QPQQQQPPGT PTISPSSSFP2160
 2161 LLPIPRDIIN SSGASSGIKV KSSTSIPDYV QVSPRRFSGS STGSGSSVAS PQLLSTSNQL2220
 2221 NNNINNLNLN SNNNNNNNNN NNNNNNTNND NNNNNDNNYN VNILLVEDNL VNAKIAMTVL2280
 2281 RKHNFRVELS KNGQLAMERI KQSHSSFDLI LMDIHMPVMD GITCSKLTRK FETEHGLKHL2340
 2341 PIIALTADAT TGHKNLCLEA GCNEFMSKPL DYALLISLLK KLVFNKDQ

YRC Informatics Platform - Version 3.0
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