YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2XC_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDWDSILAY NTIKVVRIRD RRLGILHLIF MIAIISYVVI YSAIIKKGYL SIEEPVGSIR  60
   61 TSLWSPNQFN GNESYCKNNA KPYPYEKLDC VYYDDALALY PIGDDVGFTA STRIEISDQK 120
  121 ANCSLMNPSC KFKTFNYSNV YLADIESFTV LIDHTMYAPS SQIQFNGGDL SGYVLDQNGN 180
  181 EIQLNESVNV IGVEGKPDVL EISKLLEFAG VNLDDPSLTN SSNPIRYDGC VLFVFIEYSN 240
  241 TFSYDLNKIK YVYSIKLVDD TIYNIPEVVI LDDVNSRLYY KRHAIRLIFI QTGVIGSFNF 300
  301 QSLLLTLVSG LGLLTVSTLI VDQLAIRFLP QRKSYSSLKF QTTESFKMKK KIVNDDGEDK 360
  361 LYHNIEAL

Type	Start	End	Confidence
Cytoplasmic	1	22	0.95
Transmembrane Helix	23	45	0.92
Non-Cytoplasmic	46	302	0.95
Transmembrane Helix	303	326	0.73
Cytoplasmic	327	368	0.82