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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MANC_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYKTFGFLF IYLIILISGT LSQKEIDSSN EQPVIEVFLV PHSHCDVGWL KTVEQYYTEN  60
   61 VTLILNNVIE TLTKDKSKKF NWAEIIYFER WWNDQNETLQ NQVKQLISNK QFYFVGGGWT 120
  121 QNDEAITDYQ AVINQMTLGH QFLFNQFGIK PEIGWQIDPF GPSTLTPTLF KLMGFKYHVI 180
  181 NRIDERIKYI FNATEMNIPE SGIMTIEREF EFLWYPSSNN PNISIFTHVL DHHYESPSLT 240
  241 IVDYEIPNLT YTSGFDFEGN PKINPPITIL NLRFRADLLV KIIKERIDLF RHNNLLLPFG 300
  301 GDFRFQDSKI EFNNMDKLIK FINSNQKTYG VNIKYSTVDE YFEKVIQDTN INWKEDTTTT 360
  361 TTTTIPIGGD EFPKLSNLDY FDYTKCDYND YQKYKTCSLY YSGFFSSYSE LKQISRQSDS 420
  421 LLRIGEFLYS FANLISNNNN NDDDDDDDND FNIQLKEISN ILVQHRNVSG ILTHHDAITG 480
  481 TAKTKVRDDY LLMLNQVQSN TMNNVIPNIV GYLLSNKSIQ NFDYSCNNTI IMNSPQIGDI 540
  541 FSISFTNSLG WDRSEYIQIQ LPPSTIVTVY NYNLISIQSQ IVQRFDKDNQ TFLYFNVETP 600
  601 SLGISTYFII ITSTNDDNVD DDVDKVFGDD ELLIYLLKNG ILSKPILSEI SEISELSSSS 660
  661 SSSSSSSSSQ ITIGNSKFNL NFNYLNENYN LLTLTSFDDL IENEYSIPIT QNYIEYISGN 720
  721 DNSYIFKPSG LPVNLKPESP KFYKVTGSLV QMITILYTNN CSQTYIVYNS TTTTTTTTTT 780
  781 TTTTNNDDSP PLELINDEQY FEIDNIVAAG WNKEIGSQFS SESINNDKTF YTSNGLELIE 840
  841 RNYKSLFNDT TEFNMIAGNY YPVINTIQIL DNKSKKQLTI LTKQSFGASS QNNGELNLLF 900
  901 IRRSTDQFVT LNETMNDISN PLIKIKVLFG NSNSIENIRT PHSLLLENPL LPIYSIVSDI 960
  961 TIDKWISIYN TVFKPFKTSL PYNLHLLTFT KQQQQQQQDF NEDNPLDYFI RFLNIYEISQ1020
 1021 SESFSQPIEF KLTNYFNNFN ITNIRESSLT FNSIINNNTN SIILNPLNLI SLIITISKN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle