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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PSTA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKIYLILIL FTFVGIILAN VEKAEVSCTC DENCNDGNKC TLDKCNNGCC SNTPININDN  60
   61 DECTVDTCNP KTGISHTPVN CDDGNSCTAD SCLCGKGCQH VPIACDDNNA CTVDSCSNST 120
  121 GCCHTPLSCD DNNPCTVDSC SNSTGCCHTP INVDDHNACT EDKCTQSGGV THTPIACDDK 180
  181 NACTVDSCSN STGCCHTPLS CDDNNACTVD SCSNSTGCVH TPINVDDHNA CTEDKCTQSG 240
  241 GVTHTPIACD DKNACTADSC SNSTGCCHTP ITCDDNNACT VDSCSNSTGC CHTPINVDDN 300
  301 NACTEDKCTQ SGGVTHTPIA CDDKNACTVD SCSNSTGCVH TPLACDDKNP CTVDSCSNST 360
  361 GCCHTPINVD DNNACTEDKC TQSGGVTHTP INCDDNNKCT VDSCSNSTGC CHTPMSCDDN 420
  421 NPCTVDSCSN STGCVHTPIN VDDNNACTED KCTQNGGVTH TPIACDDKNA CTVDSCSNST 480
  481 GCCHTPLKCD DNNACTVDSC SNSTGCVHTP INVDDNNACT EDKCTQSGGV THTPISCDDK 540
  541 NPCTIDSCSN STGCVHTPMS CDDRNPCTSD FCSWEKGCQH VALSCNDFNA CTMDSCSNST 600
  601 GCTHTPIACD DKNACTVDSC SNSTGCVHTP LTCDDNNPCT VDSCSNSTGC CHTPINVDDH 660
  661 NACTEDKCTQ SGGVTHTPIA CDDKNACTVD SCSNSTGCCH TPLSCDDNNA CTVDSCSNST 720
  721 GCVHTPINVD DNNACTEDKC TQNGGVTHTP IACDDKNACT VDSCSNSTGC CHTPLKCDDN 780
  781 NPCTVDSCSN STGCVHTPMN VDDNNACTED KCTQNGGVTH TPIRCDDLNS CTADSCSNST 840
  841 GCVHTPINCD DNNKCTADSC SNSTGCCHTP ISCDDNNPCT VDSCSNSTGC CHTPINVDDN 900
  901 NPCTEDKCTQ SGGVTHTPIG CNDNNACTVD SCSNSTGCTH TPMKCDDNNP CTIDSCSNST 960
  961 GCVHTPMNCD DGNFCTLDSC CSTGCTHTPI IIDDNNPCTV DSCCNSTGVV HTPVDCNDNN1020
 1021 VLTCDYCSIK QGGKCIHVPM TQCKTFGKCG DDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle