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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60474735
Protein type: Globular with Signal Peptide
Type Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNRYIIFLY LFVIISQIYC SDPPKCKTTK NVYKDSQVFG DGDSKEKNVE WWFLEQLSHS  60
   61 KGAIYTDSTL KEMNSEINEI VDFNIRDPNT TKPNPITSTY KQSIPNESGA ILFNSLSYND 120
  121 QPSNGDDSVC VNYFIFFFFF FFFFDYYLLL IAHAKGFFIW NENGGIHVIH SVPRSPETGY 180
  181 EPLFNYDKHT LNNQHAQHSI CITLSKEELH IIPKYIIYSN LNIRTINTVF KKVKRVSSAN 240
  241 SYSEYLKTEL DRKNQNVINL ETINSKIEPP KTFIELDNLM KDHIIVGNEP DIWNGVIYLN 300
  301 KWSQLAELIL NQEITSSNPT LNPLESNVHY NKIYESDKGR YFIQTTNKNL YKKYNEKIEE 360
  361 THKEKIKFFI IWHYIDNFKN GNNFKTMVHT QTKITKGENA ISQAVESIYL SYRFETPWSK 420
  421 VISADSGSDH SKISYQFNNI DKVDSGGGGG TICFGDLNWQ GKQEARGGGA FCSDKMKYLS 480
  481 EYFYRRVGII RHPENNQYLK KESLRLNSIA GQKLNLNGLI TKYPNSLKEI LGNRKLDFET 540
  541 KVKGYGDDEK YYHLNPFIIV YNNEKDEDKL FSNEYNYGYD NVYIPLLTQL KDQTTTNKYK 600
  601 SEFFDFNVFP SINGEIILCD DNDVTCSFEK SKSYQLYKDI YVESTLTVTL KKDKSVKDET 660
  661 ENTIVVPTST VTPFPDKIYI DLKTVNSVKE LYEKLNFKKN ENIIQLKEVN IEDLEKFKFP 720
  721 KEGDQSDSEE GHDDKDYNEI NKKICKAYPS DTDSKIINYH PDCQDHLIYC ILLTENKHGD 780
  781 LQNIDSIEEF RKVLGEYTKD VSIKYILF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle