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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60474734
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKYIIVLY LFLLISQIYC VPPKCITTKN VYTKSQVFID KDGEKNVEWW VLEQLSQSQG  60
   61 AIYTDNELNG ANPVINELAY YNIRNPDEPN PITSTYIQSY PNKSGKTIYN SLTYNDQPSN 120
  121 SGNSAHAKGF FIWNEEGGIH VIHSVPNSPE TGYKPLFNFK ENTLKSQHAQ HSICITLSKE 180
  181 ELHIIPKYII YGNLNIQTIN TVSPGSGAKR VSSAMFLYSQ VLKEEVDKKK TGVIDLDVID 240
  241 SKILATKIPK TFKELDGLMS EYIFDNKKND GDPDIWNGVI YLNKWSQLAD LILNKDITSS 300
  301 DTNLKPKETN VHYYKINESD KGRYFIQTTN INLYKEYSEK NKEAHKDGIK FFIVWHFIDS 360
  361 SKNDLPNGNN FKTMVHTQTK KGRGRNSITQ AVESINISYR FETPWSKVIR ADSGSDHSKM 420
  421 SYQFNDVDKV GSGGGGGMIC FGDLNWQGKQ EARGGGAFCS DKMKYLSEYF YRRVSIIRHP 480
  481 EDNQYLKKES LRLNSIAGQK LNLNVLITKY PSDLRAILGK RKLDFETKVK GYGDDKNYYH 540
  541 LNPFNIVYNE DKLFANEYNF GYENVYIPLL TKLIGQTTTN KYKSEFFDFN VFPSVKGEII 600
  601 LCDDNDVTCS FEKSKSYQLF KDIYVESTFT DVELDKFDHP IIEIVNEVIV PSIVSPFPDR 660
  661 IYVDLKTVKL VQQIYTKLLL STNKNIIQLK EVQMKLEPFE FSDNEKNKEI CKAYPNDPDS 720
  721 KIIKYLPGCQ DLLIYCIILT ENKQNVLGKI DSNDVLIGAL GEYTKNLKDI DNSQWCIKDK 780
  781 KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle