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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60462339
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKHRVLII VIVMTLVVMI SYSSILNINT AQTSINNQKN GVGNKNEEMD IDDMKNVENE  60
   61 KLDAEILRKQ KRERQQNGEN VFDANNIQVG LPDSNNNNLL FGNEDDIPIQ TTLKKTDDKL 120
  121 LIECLVRASK QNNQLSIEKT KENWFTYMKK ISSEKKEKCH YSNQRDYDEQ PVRVVRQLTD 180
  181 FQENVECHLP CSSVHQGGAY IDSSIYSHST CEKSMYETLE NVRPYGRKYD IVATTDTKSD 240
  241 VPLGYYSWNE YPYFKKPIKK IHNKDQGLVA AFISNCGPQF RLDYMNKLIA AGIKVDSYGH 300
  301 CNHNKEQRKT KAQDYNGAKM EISSSYKFVM SFENSETDDY VTEKLFGVFT IGSVPIYHGA 360
  361 PNGKKFFPSP NAGIFVNDFE SPEDLAAHLK FLDENDEEYE KCLQWKKTGP TKDWMVVMDQ 420
  421 LKANGDCRTC IKVADLQRKE VGMVVNKNTS MQLVPKSFTP NDGIVVFIRE RNTFWFTSVA 480
  481 IPYSTTYVEL VEIFSNALNH KGEIYSANDL WSKEPIIDFK MKDKTIKLTQ NQEIEVLFAD 540
  541 LDFFWHSKKL PPGEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle