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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GACV_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNSNNNIK TYYIIGIITL IFIVSAVIKN QLSSSNQEQQ EEEEETDSMG KSKGRGNKKG  60
   61 KKPEKIQEKK LDNHLKNLEK VKLQEDFKLQ QDEKQQLKKE ETILVEKQEI VVDELKNKKD 120
  121 EEKQQQQQEE DQQQQQQQQQ EEEEEEEEQQ EIEEDEEEEE GQEQEEEEEQ QEIEEGEEEQ 180
  181 QEEEQEEEQF SMFGVSIERL MDFQRQEDEN EGSDEVEESS KVPIVLSFML DRIKNLNGFK 240
  241 TEGLFRVNGN LKLVEQLATE GFDPFSDDLD PNVNTWASLL KKWIRDLPEP LIPHELNPII 300
  301 LDFCTNNNIN NTCNNNNDNN NNNNFNVCAS TNNLGNVLNL STNICNNNNN NNNNNNNNNN 360
  361 NNNNNDNNNN NNESIEKKIT NIINMIKSDD HRNVLYKIGE FFGEMLQEET VLITKINVES 420
  421 LSKILTPSLF KPNNIIDDFS NGSLNGSGNQ IPKYLTTLDL PSILLKQKKE IAFVSCLLNY 480
  481 FKDEYSKKLQ EQNDQEEDNQ EEEKDNQEED EDEEDKDQEE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle