YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HSSB_DICDI
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTILSAITSI SKPNKISKSA VSSFGGSTLS MGSNSVACGG CGGGSYGGSS GSGSYSSSGG  60
   61 IAIGLAVSID LNISATVGAI LGGGGSRGSC GCH

Type	Start	End	Confidence
Cytoplasmic	1	20	0.75
Transmembrane Helix	21	43	0.69
Non-Cytoplasmic	44	60	0.81
Transmembrane Helix	61	83	0.71
Cytoplasmic	84	93	0.69