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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX14_DICDI
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDDINNNN NNNNNNNNNN NSQELDQQEQ TQEEITKQRI QKRKEEAKRI MEERKKREQQ  60
   61 PPSQRQYEDV EDDQQQQPIR PIKQLPQRQQ QYDDNDEPPQ QQQYEPKISQ RKVPLPPMKQ 120
  121 PTTSSTASAA TGSILSPSSN FREDMVKKAV LFLNNPNVKN TALARKVAYL EKKGLTSDEV 180
  181 KEALKRVETG NINGSSTNNS NITQSNSISR TRNDNYGNNN NNSSNNNNNI QQQQYYQQQQ 240
  241 QQHQQQQQMA LTQIQSYQKR LEADDQRIAQ LMMNNNRFSW NSFLFSVTAI VGAASGLAYL 300
  301 TSNYIIPFLN GGKTNKDASA NMDKKITSLQ EEIIKLQSTI IQQGNDFRES TKSLKTLIEQ 360
  361 QQQQILQQQQ INSVSTTTNS ATSASNSSEI VEIKKELKNL INLIGNKENS NNSNNNSNNS 420
  421 NNNNGYSKYN GFNGVYNKSS YDDVSTNNNN KTNSPPSPNK PTTTTTTTAT STPGSNISNT 480
  481 NKTLPPIIKT NPYSHLSWKL PTDQPPVIPS WQQKSSNPPS DLSNANDKSS PSNSNPSTPT 540
  541 KPYQSSFNYG DVNSFVGGSN TLNFDEKPTT TTTTSTTPSN ERPSSPSVNN NNNNNNNNNN 600
  601 NNNNNNNNNN NTTIASTSNE SNNSKVETTS NDSDKSTSPS SSSNNTTSTT ATTTTITSAS 660
  661 TEDNKQQSDE TPYSSDFLDV INQLKQGKTP PGIRTDIDDK PLENSTVTKS AKERPKKPWE 720
  721 RDTLTSVTNN LSVEETQTIN NTDSSVEK

YRC Informatics Platform - Version 3.0
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