YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60462808
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLKGRELF IAMIAAIFII GFITILSFDG GMNRGGDNPL PQKWRKVGVQ PKVETTTTTT  60
   61 STYVNLQNTG NQINQGNQNI EGGGQGTQYD KNRRKLPRIK KGQVNPFNKI DKVYKENEDL 120
  121 NKKRSLLIRE EMKFSWEKYR EFAWGYDELK PVEKRGHDWF GLGLSIVDSL DTLYLMGLDK 180
  181 EYKEGKDWVE NVLNHRKDTG KKVSVFETTI RFLGNYNTMY SLTGEQLYLD LGRDIADLLL 240
  241 YAFNDHSPFP ASFVSLTDHK VSYQRWAGDC IILCEPASML LELNELSRIT GDPKYKEYSD 300
  301 KIVDALASMK PSIPGLYPTF ITQDGKGFCN NKISVGAMGD SFYEYLLKMW IYQDGIEERY 360
  361 SELFQLSADA IIEHLYKVSK KGDGFITNLD GGSVSNTQEH LTCFAGGMFM LAAASNITGD 420
  421 DEKSALYMEV GEKVTRTCAK TYDITPTGLG PEIAYIEPDS GDIRFNGYKA DSSYILRPET 480
  481 IESIFVAYRL TGNTEYQEMA WKIFQAIVDV CKTEHGYVGL NDVSNSWAFQ DFQQSFFLAE 540
  541 TLKYLYLTFQ PSSLVPLDKY VFNTEAHPIE IQYKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle