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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PEX13_DICDI
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRSPPKPWE NNSGGGGSTS MTGSGGISRP MSGPQRTTSP GGGSSTTTQT STLNNTGSPS  60
   61 TSVGGPLVTR PRTPMRPWES GGAGSSSIDS FGGGVGGSSG YRSSYGGGYR DSYSSGGYGS 120
  121 SGYGSSYGSG GSGGYGSSLY GGGGYSSGGY GGSGYGSSYG GGYGSSYGSG YGSSYGGSGY 180
  181 GSSYGGGYGS SYGGGYGGGY GGGYGQRGYD NMDGKGGALQ SVVSSGHSWM EALHSIVDTF 240
  241 SRFSRLLDAN FDAVHGSFSS IIRLCQSMSH FSYEIMAIIK TYSLFRMFQS VASRFLRVFR 300
  301 YLLGKKSKSN SSNNNTSSKF GSNAITESLR QANMDVSDFR NFQNEKKQSV GTLILIIAAT 360
  361 FIGVPMVIGQ LLNLRRRGQA SRLDKGWEEQ QGGGYGQVKA IYEFNPETTR DLPLRVGDIV 420
  421 NVIDKPHDNW WVGECNGLSG FFPVDFTEKI SPNDINNNNN NNNNNNNNIN TSVQIYDNNN 480
  481 GFNRNNSNNN LNNSEYSDYS SSNNNNNNNN NNNNNSNYQL QSNFSSNNDG ISKNIIYNNN 540
  541 NDNQRPISPS KTSQQLSRSE LMDKPYVEES 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle