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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SQRD_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKSIMYALA VAPAVTSSSD KLPNGVVSAS QLGSEKEKRK LKNVTKIVIV GGGAGGLSVA  60
   61 SQLEHKFKNK GDIVIVEPSE KHYYQPLWTL VGGGIFSRKD SEKDEKDFIP KGATWVKDSV 120
  121 TVFKPEENIV LTKDGKEIDY DYLVVSTGLE LYWDRVKGLK ENLGKNGVTS NYSYDSCEKT 180
  181 FEFIKSLKPG NVAIFTVPTT GVKCGGAPQK ILWLCDDYLR KHGIRDKVRL DFNSAGASMF 240
  241 PVKKYSEVLD KMAKERGVNQ NFAHNLVEIK GDSKEAVFET PQGNKTVKYD MIHVVPPMGP 300
  301 HSVIKNSPLA DPATGFVNVD KGTLQHVKYD NVFSLGDTSN LPTSKTAAAI TSQAPILVGN 360
  361 LINHKLGLPL NHKYDGYTSC PITTSYSKII LAEFKYGFEV DESLPFDQSK ESYFPMFLKK 420
  421 YVFPTAYWEG MLKGRWFGKN TLFNPIKTPE IN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle