YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60474554
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIFSLFLLI FIFVNIVKSN TTPKSLFKNE EIIDSSEDVK VILIMTFKRM NDFSKCLDSI  60
   61 ISANHSNEYH LVLTQSVSMN DYNEYNQLED ILNEKINQNQ NQKLFKSITH IETESSSKQP 120
  121 YGNAYFAFKN LVHGMKFTVE KLFPNLQSLI IFEEDVEISK DVFEFFEASK SIMKKDKSIK 180
  181 FATTAFFLHT THPQYNWLLD KPLKRKSIRN ENSLSLLVPN QLNKVTFNGE IEFKVLSWLL 240
  241 DRSIINQLIL DFNIIENWVI ENKFEDKIEN KPNTNKPELL KNNCDCWNHD RYLELRFKGL 300
  301 KFIGSQSPRC NHIPVGGFGL SSVLDDYGFP VNQDYIKSNQ FVMGDEINGE KSVWGIVKEF 360
  361 LPKFECPSRI NCYNNQTNQY CGTLKVSTCL NIWGPPPLQC VPCSGRKTST LDPQCNQEFS 420
  421 SCCKENCNAH NPFFISIPSL H

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	441	0.99