YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DCD3B_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENEINYWGV PDSPIDWCEE NYIISKYICE FYNTFSSFII TAFGVYGIFL MMSASSRDQA  60
   61 LFQHVKIMKE LKIRQKVLFS YLSLAIVGVG SAFYHATLLY KNQLFDEFPM MLTASMFVYC 120
  121 ILTIDPVDEK NDTATYKLMR RFLPYILSLY VIVVAITITI IRDSPIILQS SFGLLIFSNV 180
  181 FLSYMYTSRC LKTPVMESNP KKFLYLCIAS MGIAYISWLT ERKLCNNGYV IPGVQLHAVW 240
  241 HALTGLAGFY YIQFFITSCL EKHGYKTKLN WNYGIASVRG FIKSY

Type	Start	End	Confidence
Non-Cytoplasmic	1	34	0.93
Transmembrane Helix	35	56	0.86
Cytoplasmic	57	76	0.95
Transmembrane Helix	77	98	0.94
Non-Cytoplasmic	99	107	0.77
Transmembrane Helix	108	127	0.89
Cytoplasmic	128	141	0.93
Transmembrane Helix	142	161	0.95
Non-Cytoplasmic	162	165	0.89
Transmembrane Helix	166	187	0.90
Cytoplasmic	188	202	0.87
Transmembrane Helix	203	219	0.97
Non-Cytoplasmic	220	236	0.89
Transmembrane Helix	237	257	0.90
Cytoplasmic	258	285	0.93