YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MFRN_DICDI
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGDHGHSHG DEGGSFYVHL IAGAAAGFAE HCGMYPIDTI KTHIQAIKPG AMQTSSLQIT  60
   61 KHIIQQHGIT GLFRGLTAVA AGAAPSHAVH FSIYELLKFK FIGSDEDHHP IKVGIAGAIA 120
  121 TMTSEAVASP MDVVKQRLQL QITDYKGLTD CTKRIWVKEG IRGFYSGYTT TLVMNVPYNI 180
  181 VYFASYESLK KIIQPWFNNK NPEERSYQLI DHLVAGGGAG MLAAAFTNPF DVVKTRLQTQ 240
  241 SDFIASSTIN SAKSIKRYGG MMDAMKTIWI EEGMDGYLRG MKPRMVFHSM SSAIVWSVYE 300
  301 YFKFILGE

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.61
Transmembrane Helix	16	35	0.45
Cytoplasmic	36	70	0.65
Transmembrane Helix	71	91	0.48
Non-Cytoplasmic	92	308	0.53