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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DHKE_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLKINNNL SPPSSPSSST TTPNLSSTNL ENNLNSNINN NINNFNLNNS TNTFNNSNNI  60
   61 IINNNNNNNN NNNNNNNNNN NNSNNNNNNI NNNNPNVNSP NEVILNNNFL KQNKKGFFKR 120
  121 NKKMIEIFLP PKFKSPIYRR CCILLGECGV YVFIYMFFLI FLRSFYPIFI CGIVSMIVLY 180
  181 IVSTKTTKYK LVALIYIFVQ SILNFTFFLQ ITNNFNNNTV NINNTDDYSN EVIEFSKLNF 240
  241 LFIMNLILSL ISIQIFFPKF TFSITLTCSL NIFNIIIHLI SIYSLNTKKL IVFQNLIVPI 300
  301 TVSFLLSFYS YILSIDNQEI EAKEKRFRNI FDTSSEALVI HKNGLIIDVN STFEKIFQIK 360
  361 QSDLINGTIW EYLPELESFF QNTNGNSKYT NQSLQQQLQQ QQQQQQQLYN TITNGGNNKQ 420
  421 TSTTSANSTP RYNNYNNNNI NSNNLNNLNV FNNLNNLNNL NNNNNNHHIH KVSRSNTGLS 480
  481 DSSSIFDDSD SVDFFSMKNI NKCPIVLDTV GITPCGSEFC AQVKIERKKD MLIGSGTSSF 540
  541 NLLNNNNNNN NNNNNNNNNN NNNNNNNNNS NNNNNNNSNN NNNNNNINNN ISNNIINNNN 600
  601 NNNNSGIITN LSQQSNNLST TNLNTSSKII NHKHKNSKQD FDVMSIVDIS AKKKLMIADQ 660
  661 ALRRAEELNQ AKINFLTTVS HEVRTPINGI LASVEILDGS QLDVTQRDFL SCIKQSADYL 720
  721 LDLITDILDF SKIEAGKFEL DRVEFNLITM LEESINIVYR TAQERGIEVL TFIDPDVPII 780
  781 LIGDPYRVKQ CVLNFLSNAI KFTHKGQVMV KVSIVDQINN NNNNNNNNNN NNNNNNNNNN 840
  841 NNNNNNNNKI VGFSNNNNNN NNNNNNGNNG ILNFKLSFSV EDSGVGIKEE VLDCLFTPFH 900
  901 QLGGSPRKYL GTGLGLSISK KLTTLMGGEI GVKSVYGVGS AFSFTSILST TSTTPISLQS 960
  961 LGSSLSIALN NLSPTIPKIS GFIYDDNIHT SNSLFNFLKL MNINLKIINP IINNNNNNNN1020
 1021 NNNNNNNNNN NNNNNNNNNN NDNNNNNNNN NDNNIDQQQL KFEFENEIDK YCNVEDDNNN1080
 1081 VILIITNQLS NDNLNYFKDK INQLNNSIYW FVLCDNGLKA IDPFYYGIVK KPNNLLNLVD1140
 1141 TVFKVYNCQL PQDLYQLLTN GSKDDYKNYL KYRNVVIKKI TEDNEKKQQQ QQQQQQQMGD1200
 1201 TLSSTKSPQY TNLPPLDISS SSNGSLNKSN RSNLLRKSSS VYSDHVAITR GMVQVNRSPR1260
 1261 PSTPPPLFNL KGNNSNPNST ELNSTNSVNG NPNNDSTLET IEPLNISETV GDLCSSGSVI1320
 1321 NNSNFIINNN FLTSSPYGSC LTPNSGTTSP SIPININNND NNNNNNNNNN NNNNNNNNNN1380
 1381 NNNNNNNNNN NNSFKKLEPD NFSPPPSILI NDNNIIPALN VTTPITISTS TSSSSSLLIN1440
 1441 NEINNKSTTS KRPSFIPPLD IQSKKLIINT ADENHKNNCI IDFEQIFGQD GKQQPQQQQQ1500
 1501 QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQKLNIGN QQQQQILSSP RLQSQLLSNC1560
 1561 DSLGNTPPVT PHRRNALIVD DTELNRKVLA QLLRRMDWSV SFAENGIEAL KEITSERCFD1620
 1621 IIFMDCQMPI LDGFETTKLL RLRELENNWK PLNIVALSAD SSSSFGQVCF DCGMNGYLGK1680
 1681 PITLITLKDT LLKWGGYRD

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