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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60475058
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGKREEKKR LLSDDSSITI NDDGAGGAKF ADEPEKDGCT TGILRALGLK EKKKPKKDMN  60
   61 KEKEFNDKFR EISMLDKDSM LNRTGSPLSG LSEEEVKRRL GVYGKNVIAQ VKPISWYKLL 120
  121 FVAFTHPFNI VLTIIATVSI ATQDYATFAV VMFMVLLSAV LRFYEEHKSS KAFIHLKSLV 180
  181 KTTVTVLRTI KGVSTEVQID IEDVVPGDIV PLKAGDVFPG DVRILESNSL FVSQSSLTGE 240
  241 FLPVEKGPDA SEEQTTIFDT PNVGIMSTNI VSGSGIGVVF DTGCRTYISS ISEILTSTQT 300
  301 TNAFDVGVKK VAYLLMGFGV VLVPIVIVIN GLTTHDWVDS TMFGLSVAVG LTPEMLPMIL 360
  361 NANLAKGAAD MSKKKTIVKQ LHSIQNMGAM DILCSDKTGT LTEDNVRLDS YIGGDKKELA 420
  421 DVLRYSFFNS SFQKGLKNVL DNSIISYYNN QFAPGTADGS NKNHHEQEAI GHGAEVKPDE 480
  481 RLIEGYALVD EFPFDFTRRR VSIILSQPES KGNLLICKGA VEEVLSCCTH LAVRDSEPIL 540
  541 LTPDLKEQML SITNELNVDG LRVLSVATKV FSTDIPSDYE YDVKNDEGGL TFYGFLSFID 600
  601 PPKSDCAGAI EMLRGNGIEI KVLTGDNLAV ARKICKDVGI DTTRVISGIE LENASPEEFD 660
  661 ELVERCTLFA KLTPIQKYNV VKALKKHKHT VGFLGDGVND ALALREADIG ISVDTATNIA 720
  721 KDASDIILLE KSLTVINTAV RTGRITHANT IKYIKMAASS NFGNVFSMLI ASAWLPFIPL 780
  781 KPLQMLTQNL LYDFSQISIP WDNVDEEYLK IPHPWSVRSL FKFMVFLGPI SSIFDVGIFS 840
  841 YMWWYLGWTT EVTQSSFQTG WYVEGLITQV FIVHMIRTVK VPFIQRWASW QLTVNTVIIA 900
  901 AICIAIPYTP LSPYLLMEKL PAMYYPGLAS TFVGYFLLTQ IVKKIYMAVF GEWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle