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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60475030
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKNKFIVA MFASIFIISS LTFLLFDGGI NKNFNQSLPP KWKINIGKDG NVEYLNDKKN  60
   61 VNENNENNNN HHNYNNANNH NANSDHNNAN NNNNHNNHNN NHNNHNNNHN NHNNNHNNHN 120
  121 NNNHNNNNNN KNGNNNNNNN NNNNKNQQRI QNTENHNQQS FKKKESSNIK DNRHKLPRFK 180
  181 DESHNPFNRI DKVYKENEKQ NIERSSKVRE AMKFSWDKYK ENAWGHDELH PVSNTWNDWF 240
  241 GMGLTIVDSL DTLYLMGLKN EYNEGREWLE KELKQKKPTG LMISVFETII RFLGQYCTMY 300
  301 DLTGDEIYRE KGRELGDLLL HAFPEGKPFP HTSINLADHR STTQSWMGEC VVLSEVGTIF 360
  361 LEFNHLSKIT GDPKYKEYSD GVVDALAAMK PTIKGLLPIY VSMDAQRFCN SRVSVGAMGD 420
  421 SYYEYLLKMW IYHDGREERY STLFQESADA IIEHLYKVSP KGDGYITIMD YDVPTNTQEH 480
  481 LTCFAGGMYA LAAVSNITGG DVEKDKLYMK VGEEVTKTCT KLYLTSATGL GPETAYFNQN 540
  541 GEIEFSGHSA APHYILRPET VESLFILYRL TGDTIYQDWA WQIFESINSV CRTNNGFAGV 600
  601 KDVSNIHTQF DDNQQSFFMA ETLKYLYLIF QPSSVIPLNK YVFNTEAHPV KIQYQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle