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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CYAD_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNNRLKNRK KPNQIHTISE EEEEEEPLFN NEDLQTQHLN SPSSDSISTS SSSSLSSVGG  60
   61 SVVGNNNSNS NGIDNNNSNN NNNNNNNNNN NNNNNNSNNN NNYTGNSIGG NDFKNKASSS 120
  121 SSTPTTSTGI GSSKFPNIKR KNSFSNRYDS GGGGSGSSRS NSFGGSNSSG GASKEFFYFD 180
  181 NDDMIQDDDL IPMLMQDQEH QLQTQYQNQQ QVQQQQNIIN SFINHENLKF PFSIIYTNKL 240
  241 HIWLSYFLFT FVLIFCCLAV GPLLWIELPP NSGCMWCRIF KLEWVISFMS LISAMFHYTI 300
  301 RRDMFPLYLS IIGFYHVLTY SEPFLEPFRV NNFFSLILTV ICIFIAFYPK NKLRRQQASN 360
  361 HHQQQQQQQQ QQRQRQQNNN RQPEKSIIKR IIQNEWFHSL IQILIVLGIV VLLFFSIFIL 420
  421 ALFMKDDKTF SGDVIDGNIN SNNNNNNNNN NNINNNNIDN NNNNIKNNNK GFIEEIEQGE 480
  481 EQLELYLENA YHIFKELVFK KFISSSVVYL ILITLLFCIS LVYHWEVRKP YTLMALASMI 540
  541 PQLTQALYKV ELTLTGVMDK GTMSHNVTPL GGGIFYILNV ISYTSFYCGL AIDVVVASGE 600
  601 KYKRLKKRGE KYHRRLSTQI NEQNAFVNKI YASGTAQLLQ KVEFMQKFVD KILFSTLEIS 660
  661 NRLQRLESSD QDIPSSLVDQ LNDIQYQTNR SLLLLNDTKL ILAIESGVIS REDVSVNLFD 720
  721 FLEDVLERTS KDIKFNNIEL VYKIDKDVPL NIILDPTALT QICFQLLSNA IKYTEEGEIG 780
  781 ILIKRILRND YEYQQEQQQP QQDNELPPFG TISEEDEEYN SNNPPPPLNQ QQQQRQQQQQ 840
  841 QEPKQIYLEI SIFDSGPGMD DDELDICNQF QPFPDIGDED DIEIKKKGSG LGLLICNKVL 900
  901 KSIGGDLIVE RYLETGGCIF KCCIPVLVDP QPKENFTFQI PLSQETNELL SDLSVLVIDD 960
  961 NPYARDSVGF IFSSVFNSAI VKSANSSVEG VRDLKYAIAT DSNFKLLLVD YHMPGCDGIE1020
 1021 AIQMIVDNPA FSDIKIILMI LPSDSFAHMN EKTKNITTLI KPVTPTNLFN AISKTFKLKE1080
 1081 FSSVVDLVDL NAPDTSTQIP LKRNRLKFKI DFPFRLPETG KPIMRVLIGE SDKSTQSKIQ1140
 1141 KVIESFGYFS TFVTDGTALI SLSKKNYYDL VIVDLELQST DGFECAQIIR DTHGEIFSNT1200
 1201 IFVPKPISTN SNDDNNNNNN NNNNNNNNDN NNNNNNNNNN NNNNNNNNNN NNNNNNNSIL1260
 1261 TSSVDTDGNH IVSSSTSTSS SFPTRRSSIG SFQTASPSMT EISHRRRVKL PIIGIWHHSD1320
 1321 IIPDDIIKKI KRVGFDGYCS FDNLEFYLQE FLLEFDRKRK SNILSPIRLF PNGSPSTNIY1380
 1381 DYSSIISNLN QASGNNNNSS PISGILNENV ISSPISLDLD LNSVSSIQSQ SSSSSSSFQH1440
 1441 NNQQQQQQQH QHQLTPTQQS IGGGNNGINQ LSFSSQQSTP IFNQSQIQHQ IISNRSKHSS1500
 1501 LSSSTSSNGS GGSGGKSRFS IPMLPSSTNR DSSPHSSSKM ALKRVQDLES VISKFVPIEF1560
 1561 QQLIAPSGME NVYLGDAICK SITIFFSDIR DFTSTTEKML VDDVIDFLNT YLAFALPSIT1620
 1621 DSGGFIDKFI GDAIMAIFPN SDMKLQAINA VKAAIRMMRS LDFMSISGFR FSSVETGVGI1680
 1681 NTGKTIIGIV GTENRMEPTA LGDAVNLASR TEQLCKEYQS RILITQFTME AIGTSIDEFV1740
 1741 IRLVDSVTVK GKSEAVNIYE VIDGEREDKR VLKMKILPWY QNGMDLYKRH CYEEALSYFQ1800
 1801 LCTEIMPNDK PTLIYIQRCI QNIKTLELQQ IQLQQLQRQQ LLQQQQQQLL LQQQLQQQQQ1860
 1861 QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ SQNIQQPQSQ QSQYVQQPQQ1920
 1921 QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQPQQQQQL QQQQQHQQQK QPSPQQQQQP1980
 1981 QQPQQQQQQQ IQNQYQHQLQ YQRQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QQQQQQQQQQ2040
 2041 QQQQQHHHHH HQQQQFQQQS QQSQQQSQQQ QQQQQQQSQQ QSQQQSQQIQ KKSQHPHSQQ2100
 2101 IQSQRHQSQP QNVDTNVKTK PQQ

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