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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60463769
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLIKIFLL FILFSIIKCQ QVPRCLYNDI YAKSSNPSLK PAENYVDWWI YEHFNKPGDK  60
   61 GSGSSFYTDS NLKNKNEKIL ELSKYNMRVK DQVSPITQTF GQANGNIFSS ISYNNAFDDG 120
  121 KGSAHAKGFF IWNEHGGIHV IHSIPYTPQE IDDFFLHSSE DSYLQHSICI TLKPNELDII 180
  181 PKYLIYTNPA IKAINNHKFD KGKMLSKLLA TSLTGINDVD ETKLDTVTDD DLKKKKYFSE 240
  241 IDEIIKKNFF VGSTLSRKIK ILQWAKLAGH ISENFEFSSD ANFKSSHYYH VNKYSFGEYF 300
  301 VQTSLPQKKG IIAEPSSKNF AQMNNIELLW QYIGKYYKNI SKWMSQTMTS NTIKGFANNV 360
  361 VSGTSFSIAL RLNYPFIDVN PQRSSSKDHS KLMYGTSDDG QQKTFCLGDL NWQRGQESRG 420
  421 GGAYCMDGIG YLVDYMERHV TWIRKDITYN IAKLGVPQST IGTEIDFSWI MNQFAAQNLD 480
  481 NPMGFEILIP QTLNPLPKRV IEPKQSNYKT TNAPLLVQPD TVGYKTEDIS IDVFPSVKDK 540
  541 VHICLQSPEC PYESSAKFNI ISNINLIVTP SQKDIHSEPV MIISSNPNLV ITVSQVLKNN 600
  601 YFSSLATEKI VQLSGNINRV YLEQTQTPNN FKFEFSPSST NTPCTITPIG TSNSISVMFD 660
  661 EACVDQLIFC LFSHYKMNSI NNIQVFNNID QASFYNDVTE IIKVFFPNIE NGDIGRCVKP 720
  721 LPPPGSITGD KIDEVMESQA DDDKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle