YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MCFS_DICDI
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTERGLKDS IAGTVAGAAC LFTGHPFDTI RVRLQTSNTP IGIMECFRNT IKYEGFSGLY  60
   61 KGVTSPLFGM MFETAVLFAG YGQMKVLLQK DENTPLTVGQ CAIAGGFAGV GASVVLTPVE 120
  121 LVKCRLQVQT TGPQKYKGSL DCLVQILKEG GIRGAYRGFT PTIAREFVGN MAFFSTYETC 180
  181 KRYFKNKENK PNDDDELNLP ALIISGGLGG MAYWTVLYPV DVAKSKIQIS EGAGPSPSIV 240
  241 KVLKEIYSKE GVKGLFRGYT PTIIRSFPAN AAMFSVYELV IKLLG

Type	Start	End	Confidence
Cytoplasmic	1	9	0.70
Transmembrane Helix	10	27	0.49
Non-Cytoplasmic	28	62	0.66
Transmembrane Helix	63	84	0.58
Cytoplasmic	85	95	0.39
Transmembrane Helix	96	117	0.60
Non-Cytoplasmic	118	285	0.63