YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DGAT2_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.37
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRFVPWNVP LYRRLETMAV AIYAMVLPVC LIMAFNLIVI PLFWGIAIPY LVWMFYFDTK  60
   61 HESGGRRVSL VRNSILWRYF RDYFPISLII NSNYDPKKNY IFAYHPHGII SIGAFCNFAT 120
  121 NANNIDEKLP GLKVHLLTLE SNFKIPFLRD VLMSFGMSSV SKKSCENILN SGAGESICLV 180
  181 VGGAEESLDA RPGLNEITLK KRKGFIKLAL VNGASLVPVY SFGENDIYDQ VPNPRGSLVR 240
  241 KIQTKIKDLT GIAPPLFMGR GIFNYDFGLL PVRHKIVTVV GEPIDIPKIK SPTDQVIEHY 300
  301 HQIYVEALQN LFDKHKNSCA DKETGNLKIN

Type	Start	End	Confidence
Cytoplasmic	1	19	0.85
Transmembrane Helix	20	48	0.86
Non-Cytoplasmic	49	102	0.66
Transmembrane Helix	103	120	0.37
Cytoplasmic	121	330	0.56