YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPRE_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVLAIVTG ASKGFGKAIA QEIVKCNPNK NQLIDLVLFA RSLDGLKSTK ESIETISTNA  60
   61 KVIDLQSLDM SNIPDVELKF KSVLENIKWE EYSKICFFNN HGTLYHLGRI EDFSDFKNIQ 120
  121 KDNDTNTTSF VVTTSLLVKK LKELGSQYSS EVTIVNSSSL CAIKAFPTWS LYCSSRAYRD 180
  181 MFFQALSLEY KLNDKFKVLN YSLGVLDTDM QSQVREECSE DDKSFYVGLK NDGKLINPNR 240
  241 SASICSNLVY SHKFETGSHL DYYDLDK

Type	Start	End	Confidence
Signal Peptide	1	16	0.76
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	267	0.99