YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX11_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGILSKPNY NQFLESLIKL LAQTSGKDKI AKILQYGAKL LGYIFLKRSK HWVDVMKKLE  60
   61 TTSGSARKVW RLGNTLAEQQ KILALFKVKN PFAFLNILAL IRQSGMYFYW VFDHLILGTN 120
  121 IGLCKFDTVK LGWYSSVSWF FGLLCSIIID LNTLAIMLKK EKSLRLTITQ NKINANNNNI 180
  181 DTHTITSEVE NKAIIDQFNE VIKKKNEIYL NCAKNGSDLI IASTLLKIYP FSQGTIGISG 240
  241 IISALIGAYQ MWPK

Type	Start	End	Confidence
Cytoplasmic	1	91	0.98
Transmembrane Helix	92	111	0.79
Non-Cytoplasmic	112	135	0.81
Transmembrane Helix	136	156	0.92
Cytoplasmic	157	228	0.97
Transmembrane Helix	229	249	0.87
Non-Cytoplasmic	250	254	0.66