YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2XD_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWDNIFSYN TAKIVTIKDR RLGGLHIIFM VLIIVYIVIY STIYKKGYLL TETPVGSIRA  60
   61 SLLAPNEFKD DSNFKYCDDN LIEYNFTKLE CDYYDEAFVS FPVGDDVSFA VTTRVKTLDQ 120
  121 VLNCSSKNPK CKYTTVSTRN VYVSDIEDFT ILIDHTMFAP SSLIQYNSKQ LKGYILDNDN 180
  181 NEIQINETIN TVGIPGKPDI LTIGKLLQLA NIDLDGASSV NSTNSVRYDG VVALVFITYS 240
  241 NTFSYNTNNF KYVYSIQKVE DTEYGVPEAV ILDNVSSRMY YNRHGIRLIF IQNGEIGSFN 300
  301 FQALLLTFVS GLGLLAISTV LVDQLAIRFL PERKTYSSHK FQITHGFSES RNKLRISQNE 360
  361 KDPLLLVETT KNNENNNNND DYNDDDNEIF DDNNNGYQNI QNNNIIL

Type	Start	End	Confidence
Cytoplasmic	1	21	0.93
Transmembrane Helix	22	44	0.90
Non-Cytoplasmic	45	302	0.94
Transmembrane Helix	303	325	0.76
Cytoplasmic	326	407	0.82